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| Clasificación | » En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Shimizu S-Pulse | 6 | 5 | 1 | 0 | 13:4 | 9 | 16 |
| 2 |
|
V-Varen Nagasaki | 7 | 4 | 2 | 1 | 17:7 | 10 | 14 |
| 3 |
|
Yokohama FC | 7 | 4 | 2 | 1 | 11:5 | 6 | 14 |
| 4 |
|
Fagiano Okayama | 6 | 4 | 0 | 2 | 8:4 | 4 | 12 |
| 5 |
|
Iwaki FC | 6 | 3 | 2 | 1 | 10:5 | 5 | 11 |
| 6 |
|
Ehime FC | 7 | 3 | 2 | 2 | 13:10 | 3 | 11 |
| 7 |
|
Vegalta Sendai | 7 | 3 | 2 | 2 | 6:5 | 1 | 11 |
| 8 |
|
Montedio Yamagata | 6 | 3 | 1 | 2 | 8:5 | 3 | 10 |
| 9 |
|
Blaublitz Akita | 6 | 2 | 3 | 1 | 5:3 | 2 | 9 |
| 10 |
|
Kagoshima United | 6 | 3 | 0 | 3 | 8:10 | -2 | 9 |
| 11 |
|
Fujieda MyFC | 7 | 2 | 2 | 3 | 5:6 | -1 | 8 |
|
Tochigi SC | 6 | 2 | 2 | 2 | 5:6 | -1 | 8 | |
| 13 |
|
JEF United Chiba | 6 | 2 | 1 | 3 | 17:9 | 8 | 7 |
| 14 |
|
Renofa Yamaguchi | 6 | 2 | 1 | 3 | 9:6 | 3 | 7 |
| 15 |
|
Oita Trinita | 6 | 1 | 3 | 2 | 5:6 | -1 | 6 |
| 16 |
|
Mito HollyHock | 7 | 1 | 3 | 3 | 7:9 | -2 | 6 |
| 17 |
|
Roasso Kumamoto | 8 | 1 | 3 | 4 | 12:20 | -8 | 6 |
| 18 |
|
Ventforet Kofu | 6 | 1 | 1 | 4 | 7:9 | -2 | 4 |
| 19 |
|
Tokushima Vortis | 7 | 1 | 1 | 5 | 5:12 | -7 | 4 |
| 20 |
|
Thespa Gunma | 7 | 0 | 2 | 5 | 4:11 | -7 | 2 |
| Ascenso | |
| Playoff | |
| Descenso |
