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| Clasificación | En casa | » Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Yokohama FC | 16 | 10 | 3 | 3 | 29:11 | 18 | 33 |
| 2 |
|
V-Varen Nagasaki | 16 | 7 | 8 | 1 | 27:19 | 8 | 29 |
| 3 |
|
Iwaki FC | 15 | 8 | 3 | 4 | 25:12 | 13 | 27 |
| 4 |
|
Shimizu S-Pulse | 16 | 9 | 0 | 7 | 21:23 | -2 | 27 |
| 5 |
|
Roasso Kumamoto | 16 | 8 | 2 | 6 | 25:26 | -1 | 26 |
| 6 |
|
Ventforet Kofu | 16 | 7 | 4 | 5 | 22:20 | 2 | 25 |
| 7 |
|
Vegalta Sendai | 16 | 6 | 6 | 4 | 18:19 | -1 | 24 |
| 8 |
|
Tokushima Vortis | 15 | 7 | 3 | 5 | 17:19 | -2 | 24 |
| 9 |
|
Fagiano Okayama | 15 | 5 | 8 | 2 | 19:14 | 5 | 23 |
| 10 |
|
Renofa Yamaguchi | 15 | 6 | 4 | 5 | 14:16 | -2 | 22 |
| 11 |
|
Montedio Yamagata | 15 | 6 | 3 | 6 | 17:16 | 1 | 21 |
| 12 |
|
Fujieda MyFC | 15 | 7 | 0 | 8 | 16:28 | -12 | 21 |
| 13 |
|
Oita Trinita | 15 | 5 | 4 | 6 | 14:19 | -5 | 19 |
| 14 |
|
JEF United Chiba | 16 | 5 | 3 | 8 | 16:18 | -2 | 18 |
| 15 |
|
Blaublitz Akita | 16 | 5 | 3 | 8 | 12:15 | -3 | 18 |
| 16 |
|
Mito HollyHock | 15 | 5 | 2 | 8 | 12:20 | -8 | 17 |
| 17 |
|
Ehime FC | 16 | 4 | 4 | 8 | 14:30 | -16 | 16 |
| 18 |
|
Tochigi SC | 16 | 3 | 3 | 10 | 16:34 | -18 | 12 |
| 19 |
|
Thespa Gunma | 15 | 2 | 4 | 9 | 14:28 | -14 | 10 |
| 20 |
|
Kagoshima United | 15 | 0 | 6 | 9 | 9:26 | -17 | 6 |
| Ascenso | |
| Playoff | |
| Descenso |
