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| 17.11.2006 | 19:00 | SpVgg Greuther Fürth II | - | 1. FC Nürnberg II | 1:0 (0:0) | |
| 18.11.2006 | 14:30 | Wacker Burghausen II | - | VfL Frohnlach | 1:2 (1:1) | |
| 14:30 | SpVgg Bayern Hof | - | SpVgg Bayreuth | 0:0 (0:0) | ||
| 14:30 | SpVgg Unterhaching II | - | FC Ismaning | 3:1 (1:0) | ||
| 14:30 | SpVgg Weiden | - | Würzburger FV | 2:0 (0:0) | ||
| 14:30 | 1. FC Bad Kötzting | - | TSV Aindling | 0:3 (0:1) | ||
| 14:30 | TSV Großbardorf | - | SV Heimstetten | 3:3 (1:2) | ||
| 14:30 | 1. FC Eintracht Bamberg | - | 1. SC Feucht | 0:0 (0:0) | ||
| 14:30 | Jahn Regensburg | - | SC Fürstenfeldbruck | 2:1 (1:1) |
| » Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Greuther Fürth II | 19 | 12 | 4 | 3 | 39:14 | 25 | 40 |
| 2 |
|
Jahn Regensburg | 19 | 11 | 5 | 3 | 41:21 | 20 | 38 |
| 3 |
|
1. FC Eintracht Bamberg | 19 | 10 | 7 | 2 | 33:22 | 11 | 37 |
| 4 |
|
SpVgg Weiden | 19 | 11 | 3 | 5 | 23:18 | 5 | 36 |
| 5 |
|
SpVgg Bayreuth | 19 | 9 | 7 | 3 | 22:15 | 7 | 34 |
| 6 |
|
SpVgg Unterhaching II | 19 | 9 | 6 | 4 | 26:10 | 16 | 33 |
| 7 |
|
TSV Aindling | 19 | 10 | 3 | 6 | 32:23 | 9 | 33 |
| 8 |
|
SV Heimstetten | 19 | 9 | 4 | 6 | 30:26 | 4 | 31 |
| 9 |
|
FC Memmingen | 18 | 6 | 6 | 6 | 19:20 | -1 | 24 |
| 10 |
|
Würzburger FV | 19 | 7 | 3 | 9 | 24:27 | -3 | 24 |
| 11 |
|
1. FC Nürnberg II | 19 | 6 | 6 | 7 | 20:25 | -5 | 24 |
| 12 |
|
1. FC Bad Kötzting | 19 | 5 | 7 | 7 | 28:29 | -1 | 22 |
| 13 |
|
TSV Großbardorf | 19 | 6 | 4 | 9 | 29:42 | -13 | 22 |
| 14 |
|
SpVgg Bayern Hof | 19 | 5 | 5 | 9 | 24:33 | -9 | 20 |
| 15 |
|
VfL Frohnlach | 19 | 5 | 4 | 10 | 25:34 | -9 | 19 |
| 16 |
|
FC Ismaning | 19 | 4 | 7 | 8 | 24:33 | -9 | 19 |
| 17 |
|
1. SC Feucht | 19 | 5 | 3 | 11 | 24:33 | -9 | 18 |
| 18 |
|
SC Fürstenfeldbruck | 19 | 3 | 3 | 13 | 26:39 | -13 | 12 |
| 19 |
|
Wacker Burghausen II | 19 | 0 | 7 | 12 | 19:44 | -25 | 7 |
