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| Clasificación | En casa | Fuera de casa | 1.ª vuelta | 2.ª vuelta | » 1.ª parte | 2.ª parte |
| # | Equipo | P | V | E | D | Goles | DG | Pun. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Unterhaching | 28 | 15 | 10 | 3 | 33:6 | 27 | 55 |
| 2 |
|
FC Memmingen | 28 | 14 | 9 | 5 | 28:15 | 13 | 51 |
| 3 |
|
Augsburgo II | 28 | 14 | 8 | 6 | 30:13 | 17 | 50 |
| 4 |
|
Bayern Múnich II | 28 | 10 | 13 | 5 | 18:10 | 8 | 43 |
| 5 |
|
FV Illertissen | 28 | 11 | 9 | 8 | 20:18 | 2 | 42 |
| 6 |
|
Wacker Burghausen | 28 | 10 | 11 | 7 | 18:16 | 2 | 41 |
| 7 |
|
1. FC Schweinfurt 05 | 28 | 10 | 10 | 8 | 21:18 | 3 | 40 |
| 8 |
|
TSV 1860 München II | 28 | 9 | 10 | 9 | 14:13 | 1 | 37 |
| 9 |
|
Ingolstadt II | 28 | 8 | 11 | 9 | 16:17 | -1 | 35 |
| 10 |
|
SV Schalding-Heining | 28 | 8 | 11 | 9 | 17:20 | -3 | 35 |
| 11 |
|
SV Seligenporten | 28 | 7 | 14 | 7 | 17:22 | -5 | 35 |
| 12 |
|
1. FC Nürnberg II | 28 | 8 | 10 | 10 | 25:26 | -1 | 34 |
| 13 |
|
TSV 1860 Rosenheim | 28 | 6 | 15 | 7 | 9:14 | -5 | 33 |
| 14 |
|
SpVgg Bayreuth | 28 | 8 | 9 | 11 | 18:24 | -6 | 33 |
| 15 |
|
SpVgg Greuther Fürth II | 28 | 6 | 14 | 8 | 21:21 | 0 | 32 |
| 16 |
|
VfR Garching | 28 | 6 | 7 | 15 | 16:33 | -17 | 25 |
| 17 |
|
TSV Buchbach | 28 | 5 | 9 | 14 | 15:29 | -14 | 24 |
| 18 |
|
SpVgg Bayern Hof | 28 | 3 | 8 | 17 | 15:36 | -21 | 17 |
| Playoff | |
| Permanencia | |
| Descenso |
