| 14. Jornada | 23.07.2008 | FK Saturn | - | Shinnik Yaroslavl | 4:0 | ||||
| 15. Jornada | 27.07.2008 | Shinnik Yaroslavl | - | Terek Grozny | 1:1 |  |
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| 17. Jornada | 09.08.2008 | Shinnik Yaroslavl | - | Luch-Energiya Vladivostok | 1:2 | ||||
| 18. Jornada | 17.08.2008 | Zenit | - | Shinnik Yaroslavl | 1:3 | |
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| 19. Jornada | 23.08.2008 | Shinnik Yaroslavl | - | FK Tom Tomsk | 0:1 | |
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| 20. Jornada | 29.08.2008 | FK Khimki | - | Shinnik Yaroslavl | 0:0 | |
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| 22. Jornada | 20.09.2008 | Dinamo Moskva | - | Shinnik Yaroslavl | 2:0 | ||||
| 24. Jornada | 05.10.2008 | FK Moskva | - | Shinnik Yaroslavl | 2:1 | ||||
| 25. Jornada | 18.10.2008 | Shinnik Yaroslavl | - | Rubin Kazan | 0:2 | ||||
| 26. Jornada | 25.10.2008 | Shinnik Yaroslavl | - | Spartak Nalchik | 2:1 | ||||
| 16. Jornada | 29.10.2008 | Lokomotiv Moskva | - | Shinnik Yaroslavl | 3:0 | ||||
| 27. Jornada | 03.11.2008 | Krylia Sovetov | - | Shinnik Yaroslavl | 4:0 | ||||
| 28. Jornada | 08.11.2008 | Shinnik Yaroslavl | - | FK Saturn | 0:1 | ||||
| 29. Jornada | 16.11.2008 | Terek Grozny | - | Shinnik Yaroslavl | 0:0 | ||||
| 30. Jornada | 22.11.2008 | Shinnik Yaroslavl | - | CSKA Moscú | 1:0 | |
Moldavia