| 17. Jornada | 03.03.2025 | FC Zlín | - | 1. SK Prostějov | 3:0 | ||||
| 18. Jornada | 09.03.2025 | Sigma Olomouc B | - | FC Zlín | 1:2 | ||||
| 19. Jornada | 16.03.2025 | Viktoria Žižkov | - | FC Zlín | 1:3 | ||||
| 20. Jornada | 28.03.2025 | FC Zlín | - | FC Sellier & Bellot Vlašim | 2:1 |  |
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| 21. Jornada | 06.04.2025 | Slavia Praha B | - | FC Zlín | 0:1 | ||||
| 25. Jornada | 27.04.2025 | AC Sparta Praha B | - | FC Zlín | 1:0 |
Eslovenia